tests_dicom_dicomSegment.test.js

import {describe, test, assert} from 'vitest';
import {
  MaskSegment,
  isEqualSegment,
  getSegment,
  getDicomSegmentItem
} from '../../src/dicom/dicomSegment.js';
import {getElementsFromJSONTags} from '../../src/dicom/dicomWriter.js';
import {cielabToSrgb, uintLabToLab} from '../../src/utils/colour.js';

// doc imports
/* eslint-disable no-unused-vars */
import {DataElement} from '../../src/dicom/dataElement.js';
import {DicomCode} from '../../src/dicom/dicomCode.js';
/* eslint-enable no-unused-vars */

/**
 * Tests for the 'dicom/dicomSegment.js' file.
 */

describe('dicom', () => {

  /**
   * Get a dicom code from simple dicom elements.
   *
   * @param {Object<string, DataElement>} simpleElements DICOM simple elements.
   * @returns {DicomCode} The corresponding DICOM code.
   */
  function getCodeFromSimpleDicom(simpleElements) {
    return {
      meaning: simpleElements.CodeMeaning,
      value: simpleElements.CodeValue,
      schemeDesignator: simpleElements.CodingSchemeDesignator,
      longValue: simpleElements.LongCodeValue,
      urnValue: simpleElements.URNCodeValue
    };
  }

  /**
   * MaskSegment test: translate to element and back.
   *
   * @param {object} segment The segment as an object.
   * @param {string} testName The test name.
   */
  function testSegment(segment, testName) {
    // segment -> simple dicom element
    // (treat simple code as code)
    const segmentSimpleElements = getDicomSegmentItem(segment);
    // cielab to RGB
    const cielabElement = segmentSimpleElements.RecommendedDisplayCIELabValue;
    const rgb = cielabToSrgb(uintLabToLab({
      l: cielabElement[0],
      a: cielabElement[1],
      b: cielabElement[2]
    }));
    // translate to segment to be able to compare
    const segment1 = {
      number: segmentSimpleElements.SegmentNumber,
      label: segmentSimpleElements.SegmentLabel,
      algorithmType: segmentSimpleElements.SegmentAlgorithmType,
      displayRGBValue: rgb,
      propertyCategoryCode: getCodeFromSimpleDicom(
        segmentSimpleElements.SegmentedPropertyCategoryCodeSequence.value[0]),
      propertyTypeCode: getCodeFromSimpleDicom(
        segmentSimpleElements.SegmentedPropertyTypeCodeSequence.value[0]),
    };
    assert.ok(isEqualSegment(segment1, segment),
      testName + ' segment from simple element');

    // simple dicom element -> dicom element
    const segmentElements = getElementsFromJSONTags(segmentSimpleElements);
    // dicom element -> segment
    const segment2 = getSegment(segmentElements);
    // compare
    assert.ok(isEqualSegment(segment2, segment),
      testName + ' segment from element');
  }

  /**
   * Tests for {@link MaskSegment} using simple DICOM data.
   *
   * @function module:tests/dicom~dicom-segment-class
   */
  test('DICOM segment class', () => {
    const number0 = 0;
    const label0 = 'Segment0';
    const algorithmType0 = 'MANUAL';
    const segment00 = new MaskSegment(number0, label0, algorithmType0);
    assert.equal(segment00.number, number0,
      'Test #00 number');
    assert.equal(segment00.label, label0,
      'Test #00 label');
    assert.equal(segment00.algorithmType, algorithmType0,
      'Test #00 algorithm type');

    const code01 = {
      meaning: 'Dimeglumine gadopentetate 469.01mg/mL inj soln 15mL pfld syr',
      value: '406400000',
      schemeDesignator: 'SCT',
      longValue: undefined,
      urnValue: undefined
    };

    const segment01 = {
      number: number0,
      label: label0,
      algorithmType: algorithmType0,
      displayRGBValue: {r: 255, g: 0, b: 0},
      propertyCategoryCode: code01,
      propertyTypeCode: code01,
      trackingId: '01234',
      trackingUid: '01234'
    };
    testSegment(segment01, 'Test #01');
  });

});